Lecture

Learning objectives

By the end of this lesson, we should be able to understand spatial proteomics and epigeneomics technologies, how they can work, and begin analyzing some spatial proteomics data.

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Hands-on component

Our in-class hands-on component will involve analyzing a spatial proteomics dataset.

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Class Lesson Notes

Prof. Fan’s notes from class: genomic-data-visualization-Lesson_14.pptx (click to download)

Prof. Fan’s code from class: code-lesson-14.R (click to download)

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Homework Assignment

Analyze a CODEX dataset for HW5. Perform analyses and create a multi-panel data visualization with a corresponding ‘figure caption’ that describes your data visualization. See slides for more details on what is expected: genomic-data-visualization-HW_5.pptx (click to download)