Lecture 13

13.0 Lesson learning objectives

By the end of this lesson, we should be able to understand spatial proteomics technologies, how they can work, and begin analyzing some spatial proteomics data.

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Hands-on component 13

Our in-class hands-on component will involve analyzing a spatial proteomics dataset.

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Class Lesson Notes 13

Prof. Fan’s notes from class: genomic-data-visualization-Lesson_13.pptx (click to download)

Prof. Fan’s code from class: code-02-22-2023.R (click to download)

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Homework Assignment 13

None. Complete Homework Assignment 12 if you have not done so yet.

For extra credit, analyze the CODEX dataset. Perform analyses and create a multi-panel data visualization with a corresponding ‘figure caption’ that describes your data visualization. See slides for more details on what is expected: genomic-data-visualization-HW_EC.pptx (click to download)