Installing SEraster • SEraster

To install SEraster, we currently recommend using remotes:

require(remotes)
remotes::install_github('JEFworks-Lab/SEraster')

We are currently submitting SEraster to Bioconductor (this section will be updated after SEraster is approved to Bioconductor).

To install SEraster, start R (version “4.4”) and enter:

# if (!require("BiocManager", quietly = TRUE))
#     install.packages("BiocManager")
# 
# BiocManager::install("SEraster")

In addition, SEraster is also compatible with SeuratObject through SeuratWrappers. SeuratWrappers implementation can be installed using remotes:

require(remotes)
remotes::install_github('satijalab/seurat-wrappers@SEraster')

Documentation and tutorial for the SeuratWrappers implementation can be found in the SEraster branch of the SeuratWrappers GitHub repository.